BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G08SP1|AL425427
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1657 0.0
>3x_Contig1677
Length = 15081
Score = 1657 bits (834), Expect = 0.0
Identities = 853/861 (99%)
Strand = Plus / Plus
Query: 1 gatcctttcctagttatcaatcgaagcttttcaaatgtcgaaaagtgttagcagcatcta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14196 gatcctttcctagttctcaatcgaagcttttcaaatgtcgaaaagtgttagcagcatcta 14255
Query: 61 tcactccgtacgattatcatctgttagctgaaaaattttgggaaaaaagctttaaaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14256 tcactccgtacgattatcatctgttagctgaaaaattttgggaaaaaagctttaaaccta 14315
Query: 121 aagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgtactgttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14316 aagacaattccattgaacaatcgaaacaggttaaacagattgtggagttgtactgttgac 14375
Query: 181 attcacgattagttctccatcttgaatctaaccgagaacagcagtttttatcacaggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14376 attcacgattagttctccatcttgaatctaaccgagaacagcagtttttatcacaggtgg 14435
Query: 241 gtttgggaataatataaaagaraaaatgttgcgtcaagtggtaagatcatccggcgtttt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 14436 gtttgggaataatataaaagaaaaaatgttgcgtcaagtggtaagatcatccggcgtttt 14495
Query: 301 tgcaaggracagttgtagattaggtttggttcgttatcaatcgactgctggtacatctac 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14496 tgcaaggaacagttgtagattaggtttggttcgttatcaatcgactgctggtacatctac 14555
Query: 361 tccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctccaaattgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14556 tccagctgctgcggttgatccaaagatttctcaaatcgttcaagatatctccaaattgac 14615
Query: 421 tttattggaaacttctgctttgattcaagaattgaagactcaattgaacatcccagatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14616 tttattggaaacttctgctttgattcaagaattgaagactcaattgaacatcccagatat 14675
Query: 481 ttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaagaagccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14676 ttcgttcccagcagctggtgctggttcagctgccccagctgctccagctgaagaagccaa 14735
Query: 541 ggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcgtttgatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14736 ggaagaagaagtcgttgaagagaagactattttctccatcaagttagaatcgtttgatgc 14795
Query: 601 caagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtcattggttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14796 caagtctaagcctaagatcatcaaagaagttaagaacttgttaggtttgtcattggttga 14855
Query: 661 agctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgctaaggaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14856 agctaagaagtttgtggaaagtgctccaaaggttttgaaggaaaacgtcgctaaggaaga 14915
Query: 721 cgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttggaatagac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14916 cgctgacaaggttaaggctgcattggaagggctaggtgccaagattgtcttggaatagac 14975
Query: 781 agatacgtcgaacacctcacgcatgtnaattccccatgtcaaaacgagttctcttctcat 840
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 14976 agatacgtcgaacacctcacgcatgtaaattccccatgtcaaaacgagttctcttcacat 15035
Query: 841 tttcctgtacataataataac 861
| ||||||||| || ||||||
Sbjct: 15036 tgtcctgtacagaagaataac 15056
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7442
Number of Sequences: 1807
Number of extensions: 7442
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)